Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Casc4Q6P2L7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casc4Q6P2L7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Casc4Q6P2L7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Casc4Q6P2L7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Gm3375-201ENSMUST00000203929 796 ntBASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Casc4Q6P2L7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Gm38027-201ENSMUST00000192315 235 ntBASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Casc4Q6P2L7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms