Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rtl3Q6P1Y1 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rtl3Q6P1Y1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rtl3Q6P1Y1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Gm21362-201ENSMUST00000194272 928 ntBASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rtl3Q6P1Y1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Il3ra-202ENSMUST00000223589 738 ntBASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rtl3Q6P1Y1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms