Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Krt39Q6IFX4 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.93■□□□□ 0.62
Krt39Q6IFX4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Gm11249-201ENSMUST00000117071 859 ntBASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Krt39Q6IFX4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Krt39Q6IFX4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.9■□□□□ 0.62
Krt39Q6IFX4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Krt39Q6IFX4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Krt39Q6IFX4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Krt39Q6IFX4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt39Q6IFX4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Krt39Q6IFX4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt39Q6IFX4 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt39Q6IFX4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt39Q6IFX4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Krt39Q6IFX4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.88■□□□□ 0.61
Krt39Q6IFX4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.88■□□□□ 0.61
Krt39Q6IFX4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms