Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pds5aQ6A026 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Pds5aQ6A026 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Gm18958-201ENSMUST00000174258 762 ntBASIC18.4■□□□□ 0.54
Pds5aQ6A026 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pds5aQ6A026 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pds5aQ6A026 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pds5aQ6A026 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pds5aQ6A026 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pds5aQ6A026 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.39■□□□□ 0.53
Pds5aQ6A026 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Gm27000-201ENSMUST00000182943 842 ntBASIC18.38■□□□□ 0.53
Pds5aQ6A026 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pds5aQ6A026 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.37■□□□□ 0.53
Pds5aQ6A026 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.37■□□□□ 0.53
Pds5aQ6A026 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.37■□□□□ 0.53
Pds5aQ6A026 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pds5aQ6A026 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.36■□□□□ 0.53
Pds5aQ6A026 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.36■□□□□ 0.53
Pds5aQ6A026 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.36■□□□□ 0.53
Pds5aQ6A026 Gm18032-201ENSMUST00000222541 538 ntBASIC18.36■□□□□ 0.53
Pds5aQ6A026 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.36■□□□□ 0.53
Pds5aQ6A026 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pds5aQ6A026 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pds5aQ6A026 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pds5aQ6A026 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pds5aQ6A026 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms