Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ltn1Q6A009 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.26■□□□□ 0.83
Ltn1Q6A009 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ltn1Q6A009 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ltn1Q6A009 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ltn1Q6A009 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ltn1Q6A009 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ltn1Q6A009 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Mir5126-201ENSMUST00000175513 77 ntBASIC20.25■□□□□ 0.83
Ltn1Q6A009 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.25■□□□□ 0.83
Ltn1Q6A009 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.25■□□□□ 0.83
Ltn1Q6A009 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Gm18206-201ENSMUST00000207027 926 ntBASIC20.24■□□□□ 0.83
Ltn1Q6A009 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Ltn1Q6A009 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ltn1Q6A009 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Gm27867-201ENSMUST00000184778 125 ntBASIC20.23■□□□□ 0.83
Ltn1Q6A009 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ltn1Q6A009 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.23■□□□□ 0.83
Ltn1Q6A009 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ltn1Q6A009 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ltn1Q6A009 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Gm1818-201ENSMUST00000169406 1184 ntBASIC20.21■□□□□ 0.83
Ltn1Q6A009 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ltn1Q6A009 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.2■□□□□ 0.82
Ltn1Q6A009 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.19■□□□□ 0.82
Ltn1Q6A009 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ltn1Q6A009 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ltn1Q6A009 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.18■□□□□ 0.82
Ltn1Q6A009 Gm29707-201ENSMUST00000196325 491 ntBASIC20.18■□□□□ 0.82
Ltn1Q6A009 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ltn1Q6A009 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ltn1Q6A009 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ltn1Q6A009 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ltn1Q6A009 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms