Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Pdzrn3Q69ZS0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Pdzrn3Q69ZS0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 Gm17807-201ENSMUST00000186869 298 ntBASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdzrn3Q69ZS0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Gm28033-201ENSMUST00000184224 96 ntBASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Gm17808-201ENSMUST00000200859 894 ntBASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdzrn3Q69ZS0 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Gm11355-201ENSMUST00000121120 306 ntBASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pdzrn3Q69ZS0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdzrn3Q69ZS0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdzrn3Q69ZS0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Gm18669-201ENSMUST00000216049 778 ntBASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdzrn3Q69ZS0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pdzrn3Q69ZS0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms