Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Gm13836-201ENSMUST00000121159 501 ntBASIC16.83■□□□□ 0.28
VclQ64727 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Gm2274-201ENSMUST00000184539 609 ntBASIC16.83■□□□□ 0.28
VclQ64727 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.83■□□□□ 0.28
VclQ64727 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.83■□□□□ 0.28
VclQ64727 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VclQ64727 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.82■□□□□ 0.28
VclQ64727 Gm17661-201ENSMUST00000170317 270 ntBASIC16.82■□□□□ 0.28
VclQ64727 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.82■□□□□ 0.28
VclQ64727 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
VclQ64727 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VclQ64727 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VclQ64727 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.81■□□□□ 0.28
VclQ64727 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.81■□□□□ 0.28
VclQ64727 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VclQ64727 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.81■□□□□ 0.28
VclQ64727 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.81■□□□□ 0.28
VclQ64727 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VclQ64727 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VclQ64727 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VclQ64727 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VclQ64727 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.8■□□□□ 0.28
VclQ64727 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.8■□□□□ 0.28
VclQ64727 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Il3ra-202ENSMUST00000223589 738 ntBASIC16.8■□□□□ 0.28
VclQ64727 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.8■□□□□ 0.28
VclQ64727 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VclQ64727 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.79■□□□□ 0.28
VclQ64727 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VclQ64727 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
VclQ64727 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VclQ64727 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VclQ64727 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Gm7889-201ENSMUST00000185591 958 ntBASIC16.79■□□□□ 0.28
VclQ64727 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Gm7791-201ENSMUST00000219066 539 ntBASIC16.79■□□□□ 0.28
VclQ64727 Gm9987-201ENSMUST00000069768 567 ntBASIC16.79■□□□□ 0.28
VclQ64727 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.79■□□□□ 0.28
VclQ64727 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
VclQ64727 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VclQ64727 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VclQ64727 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.78■□□□□ 0.28
VclQ64727 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VclQ64727 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.78■□□□□ 0.28
VclQ64727 Gm18959-201ENSMUST00000208954 655 ntBASIC16.78■□□□□ 0.28
VclQ64727 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.78■□□□□ 0.28
VclQ64727 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VclQ64727 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VclQ64727 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.78■□□□□ 0.28
VclQ64727 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms