Protein–RNA interactions for Protein: Q62504

Spen, Msx2-interacting protein, mousemouse

Known RBP Predictions only

Length 3,644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpenQ62504 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.2■□□□□ 0.02
SpenQ62504 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.2■□□□□ 0.02
SpenQ62504 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.2■□□□□ 0.02
SpenQ62504 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SpenQ62504 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SpenQ62504 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.19■□□□□ 0.02
SpenQ62504 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.19■□□□□ 0.02
SpenQ62504 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.19■□□□□ 0.02
SpenQ62504 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.19■□□□□ 0.02
SpenQ62504 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SpenQ62504 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SpenQ62504 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SpenQ62504 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.18■□□□□ 0.02
SpenQ62504 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.18■□□□□ 0.02
SpenQ62504 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.18■□□□□ 0.02
SpenQ62504 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.18■□□□□ 0.02
SpenQ62504 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SpenQ62504 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.18■□□□□ 0.02
SpenQ62504 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.18■□□□□ 0.02
SpenQ62504 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.18■□□□□ 0.02
SpenQ62504 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SpenQ62504 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.17■□□□□ 0.02
SpenQ62504 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.17■□□□□ 0.02
SpenQ62504 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.17■□□□□ 0.02
SpenQ62504 Gm14494-201ENSMUST00000118786 435 ntBASIC15.17■□□□□ 0.02
SpenQ62504 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SpenQ62504 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.16■□□□□ 0.02
SpenQ62504 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.16■□□□□ 0.02
SpenQ62504 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.16■□□□□ 0.02
SpenQ62504 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SpenQ62504 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SpenQ62504 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.16■□□□□ 0.02
SpenQ62504 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.16■□□□□ 0.02
SpenQ62504 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SpenQ62504 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Phf7-203ENSMUST00000226565 1971 ntBASIC15.16■□□□□ 0.02
SpenQ62504 Gm6296-201ENSMUST00000222599 943 ntBASIC15.16■□□□□ 0.02
SpenQ62504 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SpenQ62504 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SpenQ62504 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SpenQ62504 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SpenQ62504 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.15■□□□□ 0.02
SpenQ62504 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SpenQ62504 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SpenQ62504 BC021767-201ENSMUST00000126387 1716 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms