Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
AtmQ62388 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AtmQ62388 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.18■□□□□ 0.18
AtmQ62388 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
AtmQ62388 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AtmQ62388 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
AtmQ62388 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
AtmQ62388 Phf7-203ENSMUST00000226565 1971 ntBASIC16.18■□□□□ 0.18
AtmQ62388 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.17■□□□□ 0.18
AtmQ62388 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.17■□□□□ 0.18
AtmQ62388 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.17■□□□□ 0.18
AtmQ62388 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
AtmQ62388 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
AtmQ62388 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.17■□□□□ 0.18
AtmQ62388 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.16■□□□□ 0.18
AtmQ62388 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.16■□□□□ 0.18
AtmQ62388 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
AtmQ62388 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Chchd1-203ENSMUST00000224633 557 ntBASIC16.16■□□□□ 0.18
AtmQ62388 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.16■□□□□ 0.18
AtmQ62388 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
AtmQ62388 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.15■□□□□ 0.18
AtmQ62388 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.15■□□□□ 0.18
AtmQ62388 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.15■□□□□ 0.18
AtmQ62388 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
AtmQ62388 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
AtmQ62388 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.15■□□□□ 0.18
AtmQ62388 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
AtmQ62388 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.15■□□□□ 0.18
AtmQ62388 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.15■□□□□ 0.18
AtmQ62388 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
AtmQ62388 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AtmQ62388 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.14■□□□□ 0.17
AtmQ62388 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AtmQ62388 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.14■□□□□ 0.17
AtmQ62388 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.14■□□□□ 0.17
AtmQ62388 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.14■□□□□ 0.17
AtmQ62388 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AtmQ62388 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
AtmQ62388 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
AtmQ62388 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.14■□□□□ 0.17
AtmQ62388 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AtmQ62388 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AtmQ62388 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
AtmQ62388 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
AtmQ62388 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.13■□□□□ 0.17
AtmQ62388 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Gm15920-201ENSMUST00000118998 402 ntBASIC16.13■□□□□ 0.17
AtmQ62388 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
AtmQ62388 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.13■□□□□ 0.17
AtmQ62388 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
AtmQ62388 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
AtmQ62388 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.13■□□□□ 0.17
AtmQ62388 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
AtmQ62388 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
AtmQ62388 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
AtmQ62388 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms