Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Gm13401-201ENSMUST00000117074 291 ntBASIC16.69■□□□□ 0.26
Vsx2Q61412 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Mir5122-201ENSMUST00000175004 89 ntBASIC16.69■□□□□ 0.26
Vsx2Q61412 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Gm10517-202ENSMUST00000192970 758 ntBASIC16.69■□□□□ 0.26
Vsx2Q61412 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Vsx2Q61412 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.69■□□□□ 0.26
Vsx2Q61412 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.69■□□□□ 0.26
Vsx2Q61412 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vsx2Q61412 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.68■□□□□ 0.26
Vsx2Q61412 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Vsx2Q61412 Gm37055-201ENSMUST00000191866 133 ntBASIC16.68■□□□□ 0.26
Vsx2Q61412 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Vsx2Q61412 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vsx2Q61412 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.67■□□□□ 0.26
Vsx2Q61412 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vsx2Q61412 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.67■□□□□ 0.26
Vsx2Q61412 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vsx2Q61412 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.67■□□□□ 0.26
Vsx2Q61412 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vsx2Q61412 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Vsx2Q61412 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vsx2Q61412 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.66■□□□□ 0.26
Vsx2Q61412 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.66■□□□□ 0.26
Vsx2Q61412 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Vsx2Q61412 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Vsx2Q61412 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Vsx2Q61412 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vsx2Q61412 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vsx2Q61412 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Idnk-204ENSMUST00000226010 1898 ntBASIC16.65■□□□□ 0.26
Vsx2Q61412 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.65■□□□□ 0.26
Vsx2Q61412 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.65■□□□□ 0.26
Vsx2Q61412 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Gm5417-201ENSMUST00000079706 384 ntBASIC16.65■□□□□ 0.26
Vsx2Q61412 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx2Q61412 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms