Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Trpc1Q61056 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.69■□□□□ 0.26
Trpc1Q61056 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.69■□□□□ 0.26
Trpc1Q61056 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.69■□□□□ 0.26
Trpc1Q61056 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.69■□□□□ 0.26
Trpc1Q61056 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trpc1Q61056 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Flg-201ENSMUST00000050758 1488 ntBASIC16.68■□□□□ 0.26
Trpc1Q61056 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Gm12527-201ENSMUST00000117967 564 ntBASIC16.68■□□□□ 0.26
Trpc1Q61056 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trpc1Q61056 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.68■□□□□ 0.26
Trpc1Q61056 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trpc1Q61056 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.68■□□□□ 0.26
Trpc1Q61056 Gm26524-201ENSMUST00000192339 390 ntBASIC16.68■□□□□ 0.26
Trpc1Q61056 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Rab3c-203ENSMUST00000224180 967 ntBASIC16.68■□□□□ 0.26
Trpc1Q61056 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.68■□□□□ 0.26
Trpc1Q61056 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trpc1Q61056 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trpc1Q61056 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.67■□□□□ 0.26
Trpc1Q61056 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.67■□□□□ 0.26
Trpc1Q61056 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.67■□□□□ 0.26
Trpc1Q61056 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trpc1Q61056 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trpc1Q61056 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trpc1Q61056 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.66■□□□□ 0.26
Trpc1Q61056 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trpc1Q61056 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trpc1Q61056 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.66■□□□□ 0.26
Trpc1Q61056 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trpc1Q61056 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Trpc1Q61056 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trpc1Q61056 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
Trpc1Q61056 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Mir2861-201ENSMUST00000175539 82 ntBASIC16.65■□□□□ 0.26
Trpc1Q61056 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Gm20049-201ENSMUST00000219950 730 ntBASIC16.65■□□□□ 0.26
Trpc1Q61056 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.65■□□□□ 0.26
Trpc1Q61056 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Trpc1Q61056 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trpc1Q61056 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trpc1Q61056 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trpc1Q61056 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpc1Q61056 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpc1Q61056 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trpc1Q61056 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.64■□□□□ 0.25
Trpc1Q61056 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trpc1Q61056 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms