Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Slc6a4Q60857 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Gm26039-201ENSMUST00000158152 144 ntBASIC17.52■□□□□ 0.4
Slc6a4Q60857 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Slc6a4Q60857 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a4Q60857 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a4Q60857 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.52■□□□□ 0.39
Slc6a4Q60857 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Slc6a4Q60857 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a4Q60857 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Slc6a4Q60857 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.51■□□□□ 0.39
Slc6a4Q60857 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.51■□□□□ 0.39
Slc6a4Q60857 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Slc6a4Q60857 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a4Q60857 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Slc6a4Q60857 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Slc6a4Q60857 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.49■□□□□ 0.39
Slc6a4Q60857 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Slc6a4Q60857 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.48■□□□□ 0.39
Slc6a4Q60857 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Slc6a4Q60857 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Slc6a4Q60857 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Slc6a4Q60857 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms