Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Scarf1Q5ND28 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Gm13474-201ENSMUST00000122466 815 ntBASIC18.69■□□□□ 0.58
Scarf1Q5ND28 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarf1Q5ND28 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Scarf1Q5ND28 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.67■□□□□ 0.58
Scarf1Q5ND28 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Gm7213-201ENSMUST00000215977 950 ntBASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarf1Q5ND28 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarf1Q5ND28 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Actl10-202ENSMUST00000226583 1501 ntBASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarf1Q5ND28 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms