Protein–RNA interactions for Protein: Q3UFQ8

Carmil3, Capping protein, Arp2/3 and myosin-I linker protein 3, mousemouse

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil3Q3UFQ8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 Gm24589-201ENSMUST00000116692 94 ntBASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 Gm18115-201ENSMUST00000221209 621 ntBASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Carmil3Q3UFQ8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Carmil3Q3UFQ8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.58■□□□□ 0.88
Carmil3Q3UFQ8 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.57■□□□□ 0.88
Carmil3Q3UFQ8 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Carmil3Q3UFQ8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Olfr129-201ENSMUST00000122318 993 ntBASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Carmil3Q3UFQ8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Carmil3Q3UFQ8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Carmil3Q3UFQ8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Carmil3Q3UFQ8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms