Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC21.31■■□□□ 1
Vars2Q3U2A8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vars2Q3U2A8 Gm15920-201ENSMUST00000118998 402 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 Gm14057-201ENSMUST00000120631 482 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vars2Q3U2A8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Vars2Q3U2A8 Gm4535-201ENSMUST00000182274 558 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 Gm6089-201ENSMUST00000197666 938 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 AC090659.1-201ENSMUST00000224334 768 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vars2Q3U2A8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vars2Q3U2A8 Gm10355-201ENSMUST00000097146 517 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vars2Q3U2A8 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vars2Q3U2A8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vars2Q3U2A8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Vars2Q3U2A8 Notumos-201ENSMUST00000151998 2659 ntBASIC21.31■■□□□ 1
Vars2Q3U2A8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vars2Q3U2A8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vars2Q3U2A8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vars2Q3U2A8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.3■■□□□ 1
Vars2Q3U2A8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Vars2Q3U2A8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vars2Q3U2A8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vars2Q3U2A8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vars2Q3U2A8 Golph3-205ENSMUST00000228671 2842 ntBASIC21.3■■□□□ 1
Vars2Q3U2A8 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vars2Q3U2A8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vars2Q3U2A8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Vars2Q3U2A8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vars2Q3U2A8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Vars2Q3U2A8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Vars2Q3U2A8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.29■■□□□ 1
Vars2Q3U2A8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC21.29■■□□□ 1
Vars2Q3U2A8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Vars2Q3U2A8 AV026068-213ENSMUST00000223675 1171 ntBASIC21.29■■□□□ 1
Vars2Q3U2A8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Vars2Q3U2A8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vars2Q3U2A8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vars2Q3U2A8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vars2Q3U2A8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vars2Q3U2A8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Vars2Q3U2A8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vars2Q3U2A8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC21.29■■□□□ 1
Vars2Q3U2A8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Vars2Q3U2A8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Vars2Q3U2A8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Vars2Q3U2A8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Gm25911-201ENSMUST00000157621 56 ntBASIC21.28■■□□□ 1
Vars2Q3U2A8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
Vars2Q3U2A8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC21.28■■□□□ 1
Vars2Q3U2A8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.28■■□□□ 1
Vars2Q3U2A8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vars2Q3U2A8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Vars2Q3U2A8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vars2Q3U2A8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vars2Q3U2A8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vars2Q3U2A8 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Vars2Q3U2A8 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vars2Q3U2A8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Vars2Q3U2A8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vars2Q3U2A8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vars2Q3U2A8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vars2Q3U2A8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vars2Q3U2A8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Vars2Q3U2A8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vars2Q3U2A8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Vars2Q3U2A8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vars2Q3U2A8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms