Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Gm27000-201ENSMUST00000182943 842 ntBASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Odf3b-204ENSMUST00000227834 930 ntBASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Ctdnep1Q3TP92 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ctdnep1Q3TP92 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Gm13216-201ENSMUST00000117145 591 ntBASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ctdnep1Q3TP92 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ctdnep1Q3TP92 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ctdnep1Q3TP92 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ctdnep1Q3TP92 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Haglr-201ENSMUST00000100000 2085 ntBASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ctdnep1Q3TP92 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms