Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pkd1l3Q2EG98 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.33■□□□□ 0.04
Pkd1l3Q2EG98 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pkd1l3Q2EG98 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pkd1l3Q2EG98 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pkd1l3Q2EG98 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pkd1l3Q2EG98 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pkd1l3Q2EG98 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pkd1l3Q2EG98 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Gm11355-201ENSMUST00000121120 306 ntBASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Gm28033-201ENSMUST00000184224 96 ntBASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.29■□□□□ 0.04
Pkd1l3Q2EG98 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Gm27389-201ENSMUST00000183622 195 ntBASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Gm17808-201ENSMUST00000200859 894 ntBASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pkd1l3Q2EG98 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms