Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim72Q1XH17 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim72Q1XH17 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.24■□□□□ 0.51
Trim72Q1XH17 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.24■□□□□ 0.51
Trim72Q1XH17 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim72Q1XH17 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.23■□□□□ 0.51
Trim72Q1XH17 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.23■□□□□ 0.51
Trim72Q1XH17 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim72Q1XH17 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim72Q1XH17 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Gm27463-201ENSMUST00000183569 57 ntBASIC18.21■□□□□ 0.51
Trim72Q1XH17 Gm7791-201ENSMUST00000219066 539 ntBASIC18.21■□□□□ 0.51
Trim72Q1XH17 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim72Q1XH17 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim72Q1XH17 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trim72Q1XH17 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.2■□□□□ 0.5
Trim72Q1XH17 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trim72Q1XH17 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.2■□□□□ 0.5
Trim72Q1XH17 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.2■□□□□ 0.5
Trim72Q1XH17 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Trim72Q1XH17 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim72Q1XH17 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim72Q1XH17 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms