Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd8Q09XV5 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd8Q09XV5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd8Q09XV5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Chd8Q09XV5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Chd8Q09XV5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Gm6007-201ENSMUST00000208170 823 ntBASIC15.32■□□□□ 0.04
Chd8Q09XV5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Chd8Q09XV5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.31■□□□□ 0.04
Chd8Q09XV5 Gm44719-201ENSMUST00000206404 149 ntBASIC15.31■□□□□ 0.04
Chd8Q09XV5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.31■□□□□ 0.04
Chd8Q09XV5 Mir3547-201ENSMUST00000175461 88 ntBASIC15.31■□□□□ 0.04
Chd8Q09XV5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.31■□□□□ 0.04
Chd8Q09XV5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Chd8Q09XV5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Gm18062-201ENSMUST00000208020 547 ntBASIC15.3■□□□□ 0.04
Chd8Q09XV5 Gm18055-201ENSMUST00000208254 547 ntBASIC15.3■□□□□ 0.04
Chd8Q09XV5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Chd8Q09XV5 Gm44335-201ENSMUST00000196879 141 ntBASIC15.3■□□□□ 0.04
Chd8Q09XV5 Gm44297-201ENSMUST00000198304 141 ntBASIC15.3■□□□□ 0.04
Chd8Q09XV5 Gm44346-201ENSMUST00000198851 141 ntBASIC15.3■□□□□ 0.04
Chd8Q09XV5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.29■□□□□ 0.04
Chd8Q09XV5 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Gm9899-201ENSMUST00000065519 555 ntBASIC15.29■□□□□ 0.04
Chd8Q09XV5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd8Q09XV5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd8Q09XV5 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms