Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Mir5126-201ENSMUST00000175513 77 ntBASIC12.62□□□□□ -0.39
Hspg2Q05793 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Gm8000-201ENSMUST00000188378 592 ntBASIC12.62□□□□□ -0.39
Hspg2Q05793 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Hspg2Q05793 Gm2756-201ENSMUST00000195851 400 ntBASIC12.62□□□□□ -0.39
Hspg2Q05793 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.62□□□□□ -0.39
Hspg2Q05793 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.62□□□□□ -0.39
Hspg2Q05793 Gm15372-201ENSMUST00000120729 834 ntBASIC12.62□□□□□ -0.39
Hspg2Q05793 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hspg2Q05793 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.61□□□□□ -0.39
Hspg2Q05793 Gm10052-201ENSMUST00000168019 960 ntBASIC12.61□□□□□ -0.39
Hspg2Q05793 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC12.61□□□□□ -0.39
Hspg2Q05793 Gm7729-201ENSMUST00000050143 801 ntBASIC12.61□□□□□ -0.39
Hspg2Q05793 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hspg2Q05793 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hspg2Q05793 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Gm25911-201ENSMUST00000157621 56 ntBASIC12.61□□□□□ -0.39
Hspg2Q05793 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hspg2Q05793 Mir5131-201ENSMUST00000175426 93 ntBASIC12.61□□□□□ -0.39
Hspg2Q05793 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.61□□□□□ -0.39
Hspg2Q05793 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Hspg2Q05793 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hspg2Q05793 Gm7862-201ENSMUST00000121461 292 ntBASIC12.61□□□□□ -0.39
Hspg2Q05793 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.61□□□□□ -0.39
Hspg2Q05793 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.61□□□□□ -0.39
Hspg2Q05793 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.61□□□□□ -0.39
Hspg2Q05793 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hspg2Q05793 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Gm10576-201ENSMUST00000191927 825 ntBASIC12.6□□□□□ -0.39
Hspg2Q05793 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.6□□□□□ -0.39
Hspg2Q05793 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Gm43213-201ENSMUST00000151866 1790 ntBASIC12.6□□□□□ -0.39
Hspg2Q05793 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Hspg2Q05793 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hspg2Q05793 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Gm12644-201ENSMUST00000119935 606 ntBASIC12.59□□□□□ -0.39
Hspg2Q05793 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Hspg2Q05793 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Hspg2Q05793 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hspg2Q05793 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms