Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.75■□□□□ 0.43
IhhP97812 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.75■□□□□ 0.43
IhhP97812 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Gm26039-201ENSMUST00000158152 144 ntBASIC17.75■□□□□ 0.43
IhhP97812 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
IhhP97812 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.75■□□□□ 0.43
IhhP97812 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IhhP97812 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
IhhP97812 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
IhhP97812 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
IhhP97812 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
IhhP97812 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
IhhP97812 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
IhhP97812 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.74■□□□□ 0.43
IhhP97812 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
IhhP97812 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IhhP97812 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
IhhP97812 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
IhhP97812 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IhhP97812 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IhhP97812 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IhhP97812 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
IhhP97812 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.73■□□□□ 0.43
IhhP97812 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IhhP97812 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Gm13186-201ENSMUST00000118031 316 ntBASIC17.72■□□□□ 0.43
IhhP97812 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
IhhP97812 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IhhP97812 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IhhP97812 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IhhP97812 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IhhP97812 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IhhP97812 Phf7-203ENSMUST00000226565 1971 ntBASIC17.71■□□□□ 0.43
IhhP97812 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.71■□□□□ 0.43
IhhP97812 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
IhhP97812 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.71■□□□□ 0.43
IhhP97812 Gm6345-202ENSMUST00000180900 204 ntBASIC17.71■□□□□ 0.43
IhhP97812 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IhhP97812 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms