Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Gm7638-201ENSMUST00000121348 967 ntBASIC16.15■□□□□ 0.18
Nkx3-2P97503 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Gm6659-201ENSMUST00000174752 547 ntBASIC16.15■□□□□ 0.18
Nkx3-2P97503 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx3-2P97503 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Gm37025-201ENSMUST00000195159 829 ntBASIC16.14■□□□□ 0.17
Nkx3-2P97503 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.14■□□□□ 0.17
Nkx3-2P97503 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.14■□□□□ 0.17
Nkx3-2P97503 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx3-2P97503 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.13■□□□□ 0.17
Nkx3-2P97503 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Gm16061-201ENSMUST00000122167 857 ntBASIC16.13■□□□□ 0.17
Nkx3-2P97503 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Il3ra-202ENSMUST00000223589 738 ntBASIC16.13■□□□□ 0.17
Nkx3-2P97503 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx3-2P97503 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkx3-2P97503 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Gm10013-201ENSMUST00000106074 672 ntBASIC16.12■□□□□ 0.17
Nkx3-2P97503 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Gm13474-201ENSMUST00000122466 815 ntBASIC16.12■□□□□ 0.17
Nkx3-2P97503 Mir5130-201ENSMUST00000175160 84 ntBASIC16.12■□□□□ 0.17
Nkx3-2P97503 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.12■□□□□ 0.17
Nkx3-2P97503 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx3-2P97503 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.12■□□□□ 0.17
Nkx3-2P97503 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.12■□□□□ 0.17
Nkx3-2P97503 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.11■□□□□ 0.17
Nkx3-2P97503 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx3-2P97503 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms