Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
PrkdcP97313 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.74□□□□□ -0.53
PrkdcP97313 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PrkdcP97313 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
PrkdcP97313 Gm4535-201ENSMUST00000182274 558 ntBASIC11.73□□□□□ -0.53
PrkdcP97313 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PrkdcP97313 Ndufaf2-202ENSMUST00000223734 556 ntBASIC11.73□□□□□ -0.53
PrkdcP97313 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.73□□□□□ -0.53
PrkdcP97313 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Gm10355-201ENSMUST00000097146 517 ntBASIC11.73□□□□□ -0.53
PrkdcP97313 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
PrkdcP97313 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.73□□□□□ -0.53
PrkdcP97313 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PrkdcP97313 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
PrkdcP97313 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.73□□□□□ -0.53
PrkdcP97313 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PrkdcP97313 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
PrkdcP97313 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkdcP97313 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
PrkdcP97313 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.72□□□□□ -0.53
PrkdcP97313 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC11.72□□□□□ -0.53
PrkdcP97313 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PrkdcP97313 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
PrkdcP97313 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.72□□□□□ -0.53
PrkdcP97313 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.72□□□□□ -0.53
PrkdcP97313 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.72□□□□□ -0.53
PrkdcP97313 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
PrkdcP97313 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Phf7-203ENSMUST00000226565 1971 ntBASIC11.72□□□□□ -0.53
PrkdcP97313 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.72□□□□□ -0.53
PrkdcP97313 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkdcP97313 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.71□□□□□ -0.53
PrkdcP97313 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.71□□□□□ -0.53
PrkdcP97313 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC11.71□□□□□ -0.53
PrkdcP97313 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Gm11780-201ENSMUST00000136880 516 ntBASIC11.71□□□□□ -0.53
PrkdcP97313 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.71□□□□□ -0.53
PrkdcP97313 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkdcP97313 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
PrkdcP97313 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.71□□□□□ -0.54
PrkdcP97313 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC11.71□□□□□ -0.54
PrkdcP97313 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkdcP97313 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PrkdcP97313 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
PrkdcP97313 Gm19721-201ENSMUST00000195284 1764 ntBASIC11.7□□□□□ -0.54
PrkdcP97313 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PrkdcP97313 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms