Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CiitaP79621 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CiitaP79621 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CiitaP79621 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CiitaP79621 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CiitaP79621 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.54■□□□□ 0.56
CiitaP79621 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CiitaP79621 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.54■□□□□ 0.56
CiitaP79621 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.54■□□□□ 0.56
CiitaP79621 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CiitaP79621 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CiitaP79621 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CiitaP79621 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.53■□□□□ 0.56
CiitaP79621 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.53■□□□□ 0.56
CiitaP79621 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.53■□□□□ 0.56
CiitaP79621 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.53■□□□□ 0.56
CiitaP79621 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.53■□□□□ 0.56
CiitaP79621 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CiitaP79621 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CiitaP79621 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CiitaP79621 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CiitaP79621 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Gm9013-201ENSMUST00000132939 882 ntBASIC18.52■□□□□ 0.56
CiitaP79621 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.52■□□□□ 0.56
CiitaP79621 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Gm5587-201ENSMUST00000206270 674 ntBASIC18.52■□□□□ 0.56
CiitaP79621 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CiitaP79621 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CiitaP79621 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.52■□□□□ 0.55
CiitaP79621 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
CiitaP79621 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CiitaP79621 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CiitaP79621 Gm25016-201ENSMUST00000158399 131 ntBASIC18.51■□□□□ 0.55
CiitaP79621 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.51■□□□□ 0.55
CiitaP79621 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CiitaP79621 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.51■□□□□ 0.55
CiitaP79621 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.51■□□□□ 0.55
CiitaP79621 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.5■□□□□ 0.55
CiitaP79621 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Gm11355-201ENSMUST00000121120 306 ntBASIC18.5■□□□□ 0.55
CiitaP79621 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CiitaP79621 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms