Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrkcbP68404 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PrkcbP68404 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PrkcbP68404 Gm23634-201ENSMUST00000175071 91 ntBASIC18.5■□□□□ 0.55
PrkcbP68404 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PrkcbP68404 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.5■□□□□ 0.55
PrkcbP68404 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PrkcbP68404 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PrkcbP68404 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PrkcbP68404 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrkcbP68404 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PrkcbP68404 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PrkcbP68404 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PrkcbP68404 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PrkcbP68404 Gm27000-201ENSMUST00000182943 842 ntBASIC18.49■□□□□ 0.55
PrkcbP68404 Gm27389-201ENSMUST00000183622 195 ntBASIC18.49■□□□□ 0.55
PrkcbP68404 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.49■□□□□ 0.55
PrkcbP68404 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.49■□□□□ 0.55
PrkcbP68404 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PrkcbP68404 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PrkcbP68404 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.48■□□□□ 0.55
PrkcbP68404 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.48■□□□□ 0.55
PrkcbP68404 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.48■□□□□ 0.55
PrkcbP68404 Gm21559-201ENSMUST00000220638 855 ntBASIC18.48■□□□□ 0.55
PrkcbP68404 Gm8587-201ENSMUST00000076538 843 ntBASIC18.48■□□□□ 0.55
PrkcbP68404 Gm10566-201ENSMUST00000086739 996 ntBASIC18.48■□□□□ 0.55
PrkcbP68404 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
PrkcbP68404 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PrkcbP68404 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.47■□□□□ 0.55
PrkcbP68404 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PrkcbP68404 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
PrkcbP68404 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.47■□□□□ 0.55
PrkcbP68404 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PrkcbP68404 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
PrkcbP68404 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.47■□□□□ 0.55
PrkcbP68404 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PrkcbP68404 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
PrkcbP68404 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PrkcbP68404 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
PrkcbP68404 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PrkcbP68404 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PrkcbP68404 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.46■□□□□ 0.55
PrkcbP68404 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.46■□□□□ 0.55
PrkcbP68404 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PrkcbP68404 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PrkcbP68404 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PrkcbP68404 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.45■□□□□ 0.54
PrkcbP68404 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PrkcbP68404 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.45■□□□□ 0.54
PrkcbP68404 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PrkcbP68404 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PrkcbP68404 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms