Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Irf5P56477 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.24■□□□□ 0.83
Irf5P56477 Gm9867-201ENSMUST00000192212 2647 ntBASIC20.23■□□□□ 0.83
Irf5P56477 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Irf5P56477 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Irf5P56477 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.23■□□□□ 0.83
Irf5P56477 Gm17971-201ENSMUST00000190239 806 ntBASIC20.23■□□□□ 0.83
Irf5P56477 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Irf5P56477 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.23■□□□□ 0.83
Irf5P56477 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.23■□□□□ 0.83
Irf5P56477 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Tgds-204ENSMUST00000228543 1594 ntBASIC20.22■□□□□ 0.83
Irf5P56477 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.22■□□□□ 0.83
Irf5P56477 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.22■□□□□ 0.83
Irf5P56477 Gm24841-201ENSMUST00000158676 357 ntBASIC20.22■□□□□ 0.83
Irf5P56477 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.22■□□□□ 0.83
Irf5P56477 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Irf5P56477 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.22■□□□□ 0.83
Irf5P56477 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Irf5P56477 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Irf5P56477 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Irf5P56477 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.21■□□□□ 0.83
Irf5P56477 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.21■□□□□ 0.83
Irf5P56477 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Gm7284-201ENSMUST00000131667 944 ntBASIC20.21■□□□□ 0.83
Irf5P56477 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Irf5P56477 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Irf5P56477 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Irf5P56477 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf5P56477 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf5P56477 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Irf5P56477 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf5P56477 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf5P56477 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf5P56477 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf5P56477 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Irf5P56477 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.19■□□□□ 0.82
Irf5P56477 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Irf5P56477 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.19■□□□□ 0.82
Irf5P56477 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Irf5P56477 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.19■□□□□ 0.82
Irf5P56477 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.19■□□□□ 0.82
Irf5P56477 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.19■□□□□ 0.82
Irf5P56477 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.19■□□□□ 0.82
Irf5P56477 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Irf5P56477 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Irf5P56477 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.18■□□□□ 0.82
Irf5P56477 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.18■□□□□ 0.82
Irf5P56477 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Irf5P56477 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.18■□□□□ 0.82
Irf5P56477 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms