Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Pdx1P52946 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.92■□□□□ 0.3
Pdx1P52946 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.92■□□□□ 0.3
Pdx1P52946 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.92■□□□□ 0.3
Pdx1P52946 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Pdx1P52946 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pdx1P52946 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pdx1P52946 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.91■□□□□ 0.3
Pdx1P52946 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.91■□□□□ 0.3
Pdx1P52946 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.91■□□□□ 0.3
Pdx1P52946 Il3ra-202ENSMUST00000223589 738 ntBASIC16.91■□□□□ 0.3
Pdx1P52946 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pdx1P52946 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pdx1P52946 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pdx1P52946 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Pdx1P52946 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pdx1P52946 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.91■□□□□ 0.3
Pdx1P52946 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pdx1P52946 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.9■□□□□ 0.3
Pdx1P52946 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pdx1P52946 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pdx1P52946 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Gm15565-201ENSMUST00000118890 427 ntBASIC16.9■□□□□ 0.3
Pdx1P52946 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.9■□□□□ 0.3
Pdx1P52946 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.9■□□□□ 0.3
Pdx1P52946 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.9■□□□□ 0.3
Pdx1P52946 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.9■□□□□ 0.3
Pdx1P52946 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.9■□□□□ 0.3
Pdx1P52946 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.9■□□□□ 0.3
Pdx1P52946 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.9■□□□□ 0.3
Pdx1P52946 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pdx1P52946 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pdx1P52946 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pdx1P52946 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Pdx1P52946 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Pdx1P52946 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.89■□□□□ 0.29
Pdx1P52946 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.89■□□□□ 0.29
Pdx1P52946 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Pdx1P52946 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.89■□□□□ 0.29
Pdx1P52946 Gm11539-201ENSMUST00000119837 557 ntBASIC16.89■□□□□ 0.29
Pdx1P52946 Gm13436-201ENSMUST00000120418 567 ntBASIC16.89■□□□□ 0.29
Pdx1P52946 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.89■□□□□ 0.29
Pdx1P52946 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pdx1P52946 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pdx1P52946 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pdx1P52946 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pdx1P52946 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms