Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.08■□□□□ 0.48
Shmt1P50431 Gm6659-201ENSMUST00000174752 547 ntBASIC18.08■□□□□ 0.48
Shmt1P50431 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.08■□□□□ 0.48
Shmt1P50431 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Shmt1P50431 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
Shmt1P50431 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Shmt1P50431 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.08■□□□□ 0.48
Shmt1P50431 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Shmt1P50431 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Shmt1P50431 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Shmt1P50431 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Shmt1P50431 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.07■□□□□ 0.48
Shmt1P50431 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.07■□□□□ 0.48
Shmt1P50431 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.07■□□□□ 0.48
Shmt1P50431 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Shmt1P50431 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Shmt1P50431 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.07■□□□□ 0.48
Shmt1P50431 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Shmt1P50431 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Shmt1P50431 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Shmt1P50431 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.06■□□□□ 0.48
Shmt1P50431 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.06■□□□□ 0.48
Shmt1P50431 Gm27000-201ENSMUST00000182943 842 ntBASIC18.06■□□□□ 0.48
Shmt1P50431 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
Shmt1P50431 Gm10566-201ENSMUST00000086739 996 ntBASIC18.06■□□□□ 0.48
Shmt1P50431 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.06■□□□□ 0.48
Shmt1P50431 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shmt1P50431 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Shmt1P50431 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.05■□□□□ 0.48
Shmt1P50431 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.05■□□□□ 0.48
Shmt1P50431 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Shmt1P50431 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shmt1P50431 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shmt1P50431 Gm13474-201ENSMUST00000122466 815 ntBASIC18.05■□□□□ 0.48
Shmt1P50431 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.05■□□□□ 0.48
Shmt1P50431 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.05■□□□□ 0.48
Shmt1P50431 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shmt1P50431 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Shmt1P50431 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Shmt1P50431 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shmt1P50431 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shmt1P50431 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.05■□□□□ 0.48
Shmt1P50431 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shmt1P50431 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shmt1P50431 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.05■□□□□ 0.48
Shmt1P50431 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Shmt1P50431 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.04■□□□□ 0.48
Shmt1P50431 Gm18958-201ENSMUST00000174258 762 ntBASIC18.04■□□□□ 0.48
Shmt1P50431 Gm22697-201ENSMUST00000175194 63 ntBASIC18.04■□□□□ 0.48
Shmt1P50431 Gm7213-201ENSMUST00000215977 950 ntBASIC18.04■□□□□ 0.48
Shmt1P50431 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.04■□□□□ 0.48
Shmt1P50431 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shmt1P50431 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms