Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.85■□□□□ 0.29
HmgclP38060 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HmgclP38060 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
HmgclP38060 Gm27463-201ENSMUST00000183569 57 ntBASIC16.85■□□□□ 0.29
HmgclP38060 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.85■□□□□ 0.29
HmgclP38060 Gm37055-201ENSMUST00000191866 133 ntBASIC16.85■□□□□ 0.29
HmgclP38060 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.85■□□□□ 0.29
HmgclP38060 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.85■□□□□ 0.29
HmgclP38060 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.85■□□□□ 0.29
HmgclP38060 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Gm5417-201ENSMUST00000079706 384 ntBASIC16.85■□□□□ 0.29
HmgclP38060 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HmgclP38060 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HmgclP38060 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HmgclP38060 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HmgclP38060 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HmgclP38060 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HmgclP38060 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.84■□□□□ 0.29
HmgclP38060 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.84■□□□□ 0.29
HmgclP38060 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HmgclP38060 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HmgclP38060 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HmgclP38060 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HmgclP38060 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HmgclP38060 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
HmgclP38060 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.83■□□□□ 0.28
HmgclP38060 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.83■□□□□ 0.28
HmgclP38060 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.83■□□□□ 0.28
HmgclP38060 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.83■□□□□ 0.28
HmgclP38060 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
HmgclP38060 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HmgclP38060 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HmgclP38060 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HmgclP38060 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.82■□□□□ 0.28
HmgclP38060 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HmgclP38060 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.82■□□□□ 0.28
HmgclP38060 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.82■□□□□ 0.28
HmgclP38060 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HmgclP38060 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HmgclP38060 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HmgclP38060 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HmgclP38060 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.81■□□□□ 0.28
HmgclP38060 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HmgclP38060 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HmgclP38060 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HmgclP38060 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HmgclP38060 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HmgclP38060 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HmgclP38060 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.8■□□□□ 0.28
HmgclP38060 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HmgclP38060 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.8■□□□□ 0.28
HmgclP38060 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HmgclP38060 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms