Protein–RNA interactions for Protein: P35584

Foxa3, Hepatocyte nuclear factor 3-gamma, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa3P35584 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Foxa3P35584 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.32□□□□□ -0.12
Foxa3P35584 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Foxa3P35584 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Foxa3P35584 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Foxa3P35584 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Foxa3P35584 Reep4-203ENSMUST00000226563 1444 ntBASIC14.32□□□□□ -0.12
Foxa3P35584 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Foxa3P35584 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.31□□□□□ -0.12
Foxa3P35584 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Foxa3P35584 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.31□□□□□ -0.12
Foxa3P35584 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Foxa3P35584 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Foxa3P35584 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Foxa3P35584 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Foxa3P35584 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.3□□□□□ -0.12
Foxa3P35584 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.3□□□□□ -0.12
Foxa3P35584 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.3□□□□□ -0.12
Foxa3P35584 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Foxa3P35584 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Foxa3P35584 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Foxa3P35584 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Foxa3P35584 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Foxa3P35584 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Foxa3P35584 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Foxa3P35584 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.28□□□□□ -0.12
Foxa3P35584 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.28□□□□□ -0.12
Foxa3P35584 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxa3P35584 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.28□□□□□ -0.12
Foxa3P35584 Gm43017-201ENSMUST00000198296 752 ntBASIC14.28□□□□□ -0.12
Foxa3P35584 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Foxa3P35584 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxa3P35584 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxa3P35584 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.28□□□□□ -0.12
Foxa3P35584 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Foxa3P35584 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxa3P35584 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms