Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.59■□□□□ 0.41
Nfkb1P25799 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nfkb1P25799 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Nfkb1P25799 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.58■□□□□ 0.41
Nfkb1P25799 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nfkb1P25799 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nfkb1P25799 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nfkb1P25799 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nfkb1P25799 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.58■□□□□ 0.4
Nfkb1P25799 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nfkb1P25799 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nfkb1P25799 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Nfkb1P25799 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nfkb1P25799 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Nfkb1P25799 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.58■□□□□ 0.4
Nfkb1P25799 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.58■□□□□ 0.4
Nfkb1P25799 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nfkb1P25799 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.58■□□□□ 0.4
Nfkb1P25799 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nfkb1P25799 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.57■□□□□ 0.4
Nfkb1P25799 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Nfkb1P25799 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.57■□□□□ 0.4
Nfkb1P25799 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.57■□□□□ 0.4
Nfkb1P25799 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.57■□□□□ 0.4
Nfkb1P25799 Gm10566-201ENSMUST00000086739 996 ntBASIC17.57■□□□□ 0.4
Nfkb1P25799 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.57■□□□□ 0.4
Nfkb1P25799 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Nfkb1P25799 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Nfkb1P25799 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Nfkb1P25799 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.56■□□□□ 0.4
Nfkb1P25799 Gm25016-201ENSMUST00000158399 131 ntBASIC17.56■□□□□ 0.4
Nfkb1P25799 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.56■□□□□ 0.4
Nfkb1P25799 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.56■□□□□ 0.4
Nfkb1P25799 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.56■□□□□ 0.4
Nfkb1P25799 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.56■□□□□ 0.4
Nfkb1P25799 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nfkb1P25799 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nfkb1P25799 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.55■□□□□ 0.4
Nfkb1P25799 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.55■□□□□ 0.4
Nfkb1P25799 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.55■□□□□ 0.4
Nfkb1P25799 Gm18958-201ENSMUST00000174258 762 ntBASIC17.55■□□□□ 0.4
Nfkb1P25799 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Nfkb1P25799 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Nfkb1P25799 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nfkb1P25799 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nfkb1P25799 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nfkb1P25799 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Nfkb1P25799 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nfkb1P25799 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms