Protein–RNA interactions for Protein: P22605

Rarb, Retinoic acid receptor beta, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RarbP22605 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RarbP22605 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.92■□□□□ 0.62
RarbP22605 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.92■□□□□ 0.62
RarbP22605 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RarbP22605 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RarbP22605 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Gm6443-201ENSMUST00000203599 874 ntBASIC18.91■□□□□ 0.62
RarbP22605 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
RarbP22605 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RarbP22605 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RarbP22605 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.9■□□□□ 0.62
RarbP22605 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RarbP22605 Gm15794-201ENSMUST00000120182 631 ntBASIC18.9■□□□□ 0.62
RarbP22605 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.9■□□□□ 0.62
RarbP22605 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.9■□□□□ 0.62
RarbP22605 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RarbP22605 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.9■□□□□ 0.62
RarbP22605 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RarbP22605 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RarbP22605 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.89■□□□□ 0.62
RarbP22605 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RarbP22605 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RarbP22605 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.89■□□□□ 0.61
RarbP22605 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RarbP22605 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Idnk-204ENSMUST00000226010 1898 ntBASIC18.88■□□□□ 0.61
RarbP22605 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Gm5864-201ENSMUST00000202263 970 ntBASIC18.88■□□□□ 0.61
RarbP22605 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RarbP22605 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.88■□□□□ 0.61
RarbP22605 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.88■□□□□ 0.61
RarbP22605 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.88■□□□□ 0.61
RarbP22605 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RarbP22605 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RarbP22605 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RarbP22605 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RarbP22605 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.87■□□□□ 0.61
RarbP22605 Mir8098-201ENSMUST00000184011 137 ntBASIC18.87■□□□□ 0.61
RarbP22605 Mir8112-201ENSMUST00000184382 131 ntBASIC18.87■□□□□ 0.61
RarbP22605 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RarbP22605 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RarbP22605 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RarbP22605 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RarbP22605 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RarbP22605 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RarbP22605 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.86■□□□□ 0.61
RarbP22605 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.86■□□□□ 0.61
RarbP22605 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RarbP22605 Gm27459-201ENSMUST00000184860 107 ntBASIC18.86■□□□□ 0.61
RarbP22605 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RarbP22605 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RarbP22605 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RarbP22605 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RarbP22605 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RarbP22605 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RarbP22605 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.85■□□□□ 0.61
RarbP22605 Gm43347-201ENSMUST00000200226 580 ntBASIC18.85■□□□□ 0.61
RarbP22605 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.85■□□□□ 0.61
RarbP22605 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RarbP22605 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RarbP22605 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RarbP22605 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RarbP22605 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RarbP22605 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RarbP22605 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms