Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Usp53P15975 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp53P15975 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.79■□□□□ 0.76
Usp53P15975 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Usp53P15975 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Usp53P15975 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Usp53P15975 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Usp53P15975 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.79■□□□□ 0.76
Usp53P15975 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Usp53P15975 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Usp53P15975 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.78■□□□□ 0.76
Usp53P15975 Gm26039-201ENSMUST00000158152 144 ntBASIC19.78■□□□□ 0.76
Usp53P15975 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp53P15975 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.78■□□□□ 0.76
Usp53P15975 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.78■□□□□ 0.76
Usp53P15975 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.78■□□□□ 0.76
Usp53P15975 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Usp53P15975 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Usp53P15975 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.77■□□□□ 0.76
Usp53P15975 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.77■□□□□ 0.76
Usp53P15975 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Usp53P15975 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Usp53P15975 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Usp53P15975 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.77■□□□□ 0.75
Usp53P15975 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Usp53P15975 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Usp53P15975 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.76■□□□□ 0.75
Usp53P15975 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Usp53P15975 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Usp53P15975 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Usp53P15975 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp53P15975 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp53P15975 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Usp53P15975 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.75■□□□□ 0.75
Usp53P15975 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Usp53P15975 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Usp53P15975 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Usp53P15975 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms