Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxd3P09027 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxd3P09027 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxd3P09027 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxd3P09027 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hoxd3P09027 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Hoxd3P09027 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.29□□□□□ -0.28
Hoxd3P09027 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Gm10013-201ENSMUST00000106074 672 ntBASIC13.29□□□□□ -0.28
Hoxd3P09027 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Gm17661-201ENSMUST00000170317 270 ntBASIC13.29□□□□□ -0.28
Hoxd3P09027 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.29□□□□□ -0.28
Hoxd3P09027 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.29□□□□□ -0.28
Hoxd3P09027 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.29□□□□□ -0.28
Hoxd3P09027 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Hoxd3P09027 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Hoxd3P09027 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Hoxd3P09027 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Hoxd3P09027 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.28□□□□□ -0.28
Hoxd3P09027 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.28□□□□□ -0.28
Hoxd3P09027 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Hoxd3P09027 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.28□□□□□ -0.28
Hoxd3P09027 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Hoxd3P09027 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Hoxd3P09027 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxd3P09027 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Hoxd3P09027 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.27□□□□□ -0.29
Hoxd3P09027 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.27□□□□□ -0.29
Hoxd3P09027 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxd3P09027 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.27□□□□□ -0.29
Hoxd3P09027 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.27□□□□□ -0.29
Hoxd3P09027 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC13.27□□□□□ -0.29
Hoxd3P09027 Gm18101-201ENSMUST00000215769 548 ntBASIC13.27□□□□□ -0.29
Hoxd3P09027 Gm18032-201ENSMUST00000222541 538 ntBASIC13.27□□□□□ -0.29
Hoxd3P09027 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxd3P09027 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.27□□□□□ -0.29
Hoxd3P09027 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Hoxd3P09027 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxd3P09027 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Hoxd3P09027 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxd3P09027 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxd3P09027 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxd3P09027 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hoxd3P09027 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxd3P09027 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxd3P09027 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxd3P09027 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.25□□□□□ -0.29
Hoxd3P09027 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxd3P09027 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hoxd3P09027 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxd3P09027 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxd3P09027 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxd3P09027 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms