Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
P01734 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
P01734 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.63■□□□□ 0.57
P01734 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
P01734 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
P01734 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.63■□□□□ 0.57
P01734 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P01734 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01734 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
P01734 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
P01734 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01734 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01734 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
P01734 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P01734 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
P01734 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P01734 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
P01734 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
P01734 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.61■□□□□ 0.57
P01734 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
P01734 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
P01734 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
P01734 Gm13474-201ENSMUST00000122466 815 ntBASIC18.61■□□□□ 0.57
P01734 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
P01734 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
P01734 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.6■□□□□ 0.57
P01734 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Gm7977-201ENSMUST00000193787 748 ntBASIC18.6■□□□□ 0.57
P01734 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
P01734 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P01734 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
P01734 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.59■□□□□ 0.57
P01734 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.59■□□□□ 0.57
P01734 Gm18958-201ENSMUST00000174258 762 ntBASIC18.59■□□□□ 0.57
P01734 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P01734 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P01734 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
P01734 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
P01734 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.58■□□□□ 0.56
P01734 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Gm18032-201ENSMUST00000222541 538 ntBASIC18.58■□□□□ 0.56
P01734 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.58■□□□□ 0.56
P01734 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
P01734 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
P01734 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P01734 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
P01734 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms