Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Tgfbr3O88393 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Tgfbr3O88393 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Tgfbr3O88393 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Tgfbr3O88393 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Gm11336-201ENSMUST00000118168 334 ntBASIC16.21■□□□□ 0.19
Tgfbr3O88393 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Gm27000-201ENSMUST00000182943 842 ntBASIC16.21■□□□□ 0.19
Tgfbr3O88393 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.21■□□□□ 0.19
Tgfbr3O88393 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.21■□□□□ 0.19
Tgfbr3O88393 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Tgfbr3O88393 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Tgfbr3O88393 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Tgfbr3O88393 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Gm28659-201ENSMUST00000188013 759 ntBASIC16.2■□□□□ 0.18
Tgfbr3O88393 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.2■□□□□ 0.18
Tgfbr3O88393 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Tgfbr3O88393 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Tgfbr3O88393 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Tgfbr3O88393 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms