Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Slc4a4O88343 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc4a4O88343 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Slc4a4O88343 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.18■□□□□ 0.82
Slc4a4O88343 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Slc4a4O88343 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC20.18■□□□□ 0.82
Slc4a4O88343 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Slc4a4O88343 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Slc4a4O88343 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.18■□□□□ 0.82
Slc4a4O88343 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slc4a4O88343 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc4a4O88343 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.18■□□□□ 0.82
Slc4a4O88343 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc4a4O88343 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.17■□□□□ 0.82
Slc4a4O88343 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.17■□□□□ 0.82
Slc4a4O88343 Gm27000-201ENSMUST00000182943 842 ntBASIC20.17■□□□□ 0.82
Slc4a4O88343 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Slc4a4O88343 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Gm10566-201ENSMUST00000086739 996 ntBASIC20.17■□□□□ 0.82
Slc4a4O88343 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc4a4O88343 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slc4a4O88343 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.17■□□□□ 0.82
Slc4a4O88343 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.17■□□□□ 0.82
Slc4a4O88343 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc4a4O88343 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc4a4O88343 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slc4a4O88343 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc4a4O88343 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc4a4O88343 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Slc4a4O88343 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc4a4O88343 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Slc4a4O88343 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.16■□□□□ 0.82
Slc4a4O88343 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.16■□□□□ 0.82
Slc4a4O88343 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC20.16■□□□□ 0.82
Slc4a4O88343 Gm21559-201ENSMUST00000220638 855 ntBASIC20.16■□□□□ 0.82
Slc4a4O88343 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
Slc4a4O88343 Gm8587-201ENSMUST00000076538 843 ntBASIC20.16■□□□□ 0.82
Slc4a4O88343 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc4a4O88343 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc4a4O88343 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Slc4a4O88343 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Gm23634-201ENSMUST00000175071 91 ntBASIC20.15■□□□□ 0.82
Slc4a4O88343 Gm27389-201ENSMUST00000183622 195 ntBASIC20.15■□□□□ 0.82
Slc4a4O88343 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.15■□□□□ 0.82
Slc4a4O88343 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slc4a4O88343 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Slc4a4O88343 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.14■□□□□ 0.82
Slc4a4O88343 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slc4a4O88343 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc4a4O88343 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc4a4O88343 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc4a4O88343 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Slc4a4O88343 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Slc4a4O88343 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.14■□□□□ 0.81
Slc4a4O88343 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.14■□□□□ 0.81
Slc4a4O88343 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Slc4a4O88343 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slc4a4O88343 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slc4a4O88343 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms