Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Gm45412-201ENSMUST00000210217 2275 ntBASIC10.44□□□□□ -0.74
Gm10139O88245 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.43□□□□□ -0.74
Gm10139O88245 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Gm27275-201ENSMUST00000184318 272 ntBASIC10.43□□□□□ -0.74
Gm10139O88245 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC10.43□□□□□ -0.74
Gm10139O88245 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Gm10139O88245 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Gm10139O88245 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Gm10139O88245 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Gm10139O88245 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC10.42□□□□□ -0.74
Gm10139O88245 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.42□□□□□ -0.74
Gm10139O88245 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC10.42□□□□□ -0.74
Gm10139O88245 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Gm24841-201ENSMUST00000158676 357 ntBASIC10.42□□□□□ -0.74
Gm10139O88245 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC10.42□□□□□ -0.74
Gm10139O88245 Gm10517-202ENSMUST00000192970 758 ntBASIC10.42□□□□□ -0.74
Gm10139O88245 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC10.42□□□□□ -0.74
Gm10139O88245 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Gm10139O88245 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Gm10139O88245 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Gm10139O88245 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Gm10139O88245 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Gm10139O88245 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Gm10139O88245 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Gm10139O88245 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Gm10139O88245 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Gm18666-201ENSMUST00000190039 958 ntBASIC10.41□□□□□ -0.74
Gm10139O88245 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.41□□□□□ -0.74
Gm10139O88245 AC107711.5-202ENSMUST00000226429 702 ntBASIC10.41□□□□□ -0.74
Gm10139O88245 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Gm10139O88245 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Gm10139O88245 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10139O88245 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Gm10139O88245 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10139O88245 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10139O88245 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Gm10139O88245 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Gm10139O88245 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10139O88245 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Gm10139O88245 Gm26596-201ENSMUST00000180464 2655 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms