Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pdlim3O70209 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pdlim3O70209 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim3O70209 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim3O70209 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim3O70209 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.53■□□□□ 0.08
Pdlim3O70209 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim3O70209 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pdlim3O70209 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.52■□□□□ 0.08
Pdlim3O70209 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim3O70209 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim3O70209 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC15.52■□□□□ 0.08
Pdlim3O70209 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.52■□□□□ 0.08
Pdlim3O70209 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim3O70209 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim3O70209 Gm11643-201ENSMUST00000119578 864 ntBASIC15.52■□□□□ 0.08
Pdlim3O70209 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim3O70209 Mtag2-201ENSMUST00000058665 714 ntBASIC15.52■□□□□ 0.08
Pdlim3O70209 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.52■□□□□ 0.08
Pdlim3O70209 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim3O70209 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim3O70209 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim3O70209 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim3O70209 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Pdlim3O70209 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim3O70209 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim3O70209 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pdlim3O70209 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.51■□□□□ 0.07
Pdlim3O70209 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.51■□□□□ 0.07
Pdlim3O70209 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.51■□□□□ 0.07
Pdlim3O70209 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pdlim3O70209 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
Pdlim3O70209 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim3O70209 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pdlim3O70209 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdlim3O70209 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pdlim3O70209 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pdlim3O70209 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
Pdlim3O70209 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pdlim3O70209 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdlim3O70209 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Pdlim3O70209 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim3O70209 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.49■□□□□ 0.07
Pdlim3O70209 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.49■□□□□ 0.07
Pdlim3O70209 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Pdlim3O70209 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pdlim3O70209 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.49■□□□□ 0.07
Pdlim3O70209 Mir6349-201ENSMUST00000184059 97 ntBASIC15.49■□□□□ 0.07
Pdlim3O70209 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Pdlim3O70209 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Pdlim3O70209 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.49■□□□□ 0.07
Pdlim3O70209 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pdlim3O70209 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms