Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Alx3O70137 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Alx3O70137 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx3O70137 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx3O70137 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.55■□□□□ 0.08
Alx3O70137 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Alx3O70137 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Alx3O70137 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx3O70137 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.55■□□□□ 0.08
Alx3O70137 Gm13401-201ENSMUST00000117074 291 ntBASIC15.55■□□□□ 0.08
Alx3O70137 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.55■□□□□ 0.08
Alx3O70137 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.55■□□□□ 0.08
Alx3O70137 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Alx3O70137 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.55■□□□□ 0.08
Alx3O70137 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx3O70137 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Alx3O70137 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Alx3O70137 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Alx3O70137 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Gm11249-201ENSMUST00000117071 859 ntBASIC15.54■□□□□ 0.08
Alx3O70137 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.54■□□□□ 0.08
Alx3O70137 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.54■□□□□ 0.08
Alx3O70137 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.54■□□□□ 0.08
Alx3O70137 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Alx3O70137 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Alx3O70137 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Alx3O70137 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Alx3O70137 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.53■□□□□ 0.08
Alx3O70137 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.53■□□□□ 0.08
Alx3O70137 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.53■□□□□ 0.08
Alx3O70137 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.53■□□□□ 0.08
Alx3O70137 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alx3O70137 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Alx3O70137 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 Gm12896-201ENSMUST00000118430 226 ntBASIC15.52■□□□□ 0.08
Alx3O70137 Gm13158-201ENSMUST00000122007 736 ntBASIC15.52■□□□□ 0.08
Alx3O70137 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC15.52■□□□□ 0.08
Alx3O70137 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.52■□□□□ 0.08
Alx3O70137 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.52■□□□□ 0.08
Alx3O70137 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC15.52■□□□□ 0.08
Alx3O70137 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.52■□□□□ 0.08
Alx3O70137 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alx3O70137 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.52■□□□□ 0.07
Alx3O70137 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Alx3O70137 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.52■□□□□ 0.07
Alx3O70137 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.52■□□□□ 0.07
Alx3O70137 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Alx3O70137 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Alx3O70137 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alx3O70137 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Alx3O70137 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx3O70137 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx3O70137 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alx3O70137 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx3O70137 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alx3O70137 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx3O70137 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Alx3O70137 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alx3O70137 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms