Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Gm42939-201ENSMUST00000197514 2205 ntBASIC12.77□□□□□ -0.37
Rpl35aO55142 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rpl35aO55142 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rpl35aO55142 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Gm3375-201ENSMUST00000203929 796 ntBASIC12.76□□□□□ -0.37
Rpl35aO55142 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.76□□□□□ -0.37
Rpl35aO55142 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rpl35aO55142 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Odf3b-204ENSMUST00000227834 930 ntBASIC12.75□□□□□ -0.37
Rpl35aO55142 Dmtn-207ENSMUST00000228001 2437 ntBASIC12.75□□□□□ -0.37
Rpl35aO55142 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Rpl35aO55142 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC12.75□□□□□ -0.37
Rpl35aO55142 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rpl35aO55142 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rpl35aO55142 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rpl35aO55142 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Rpl35aO55142 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rpl35aO55142 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Rpl35aO55142 Gm21814-202ENSMUST00000203277 873 ntBASIC12.74□□□□□ -0.37
Rpl35aO55142 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.74□□□□□ -0.37
Rpl35aO55142 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Rpl35aO55142 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rpl35aO55142 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.74□□□□□ -0.37
Rpl35aO55142 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.73□□□□□ -0.37
Rpl35aO55142 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.73□□□□□ -0.37
Rpl35aO55142 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.73□□□□□ -0.37
Rpl35aO55142 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rpl35aO55142 Gm38027-201ENSMUST00000192315 235 ntBASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms