Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Gm5587-201ENSMUST00000206270 674 ntBASIC19.65■□□□□ 0.74
Copb2O55029 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Copb2O55029 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Copb2O55029 Actl10-202ENSMUST00000226583 1501 ntBASIC19.65■□□□□ 0.74
Copb2O55029 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Copb2O55029 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Copb2O55029 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Copb2O55029 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Copb2O55029 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Copb2O55029 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Copb2O55029 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Copb2O55029 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Copb2O55029 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.63■□□□□ 0.73
Copb2O55029 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.63■□□□□ 0.73
Copb2O55029 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Gm7284-201ENSMUST00000131667 944 ntBASIC19.63■□□□□ 0.73
Copb2O55029 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Copb2O55029 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.63■□□□□ 0.73
Copb2O55029 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Copb2O55029 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Copb2O55029 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.62■□□□□ 0.73
Copb2O55029 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Copb2O55029 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Copb2O55029 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Copb2O55029 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Gm14859-201ENSMUST00000117752 357 ntBASIC19.62■□□□□ 0.73
Copb2O55029 Gm11355-201ENSMUST00000121120 306 ntBASIC19.62■□□□□ 0.73
Copb2O55029 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.62■□□□□ 0.73
Copb2O55029 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.62■□□□□ 0.73
Copb2O55029 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Copb2O55029 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.62■□□□□ 0.73
Copb2O55029 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Copb2O55029 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Copb2O55029 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Gm9013-201ENSMUST00000132939 882 ntBASIC19.61■□□□□ 0.73
Copb2O55029 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.61■□□□□ 0.73
Copb2O55029 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Copb2O55029 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Copb2O55029 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Copb2O55029 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.6■□□□□ 0.73
Copb2O55029 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.6■□□□□ 0.73
Copb2O55029 Gm29518-201ENSMUST00000190858 372 ntBASIC19.6■□□□□ 0.73
Copb2O55029 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Copb2O55029 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Copb2O55029 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Copb2O55029 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Copb2O55029 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Copb2O55029 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Copb2O55029 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Copb2O55029 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms