Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Banf1O54962 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Banf1O54962 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.43■□□□□ 0.38
Banf1O54962 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Banf1O54962 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Banf1O54962 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Banf1O54962 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Banf1O54962 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Banf1O54962 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Banf1O54962 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Banf1O54962 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.42■□□□□ 0.38
Banf1O54962 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Banf1O54962 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.42■□□□□ 0.38
Banf1O54962 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.41■□□□□ 0.38
Banf1O54962 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Banf1O54962 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Banf1O54962 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.41■□□□□ 0.38
Banf1O54962 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Banf1O54962 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.41■□□□□ 0.38
Banf1O54962 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.41■□□□□ 0.38
Banf1O54962 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.41■□□□□ 0.38
Banf1O54962 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Banf1O54962 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Banf1O54962 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.41■□□□□ 0.38
Banf1O54962 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Banf1O54962 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Banf1O54962 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Banf1O54962 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.4■□□□□ 0.38
Banf1O54962 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Banf1O54962 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Banf1O54962 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.4■□□□□ 0.38
Banf1O54962 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.4■□□□□ 0.38
Banf1O54962 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.4■□□□□ 0.38
Banf1O54962 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Banf1O54962 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.4■□□□□ 0.38
Banf1O54962 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Banf1O54962 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Banf1O54962 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Banf1O54962 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Banf1O54962 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Banf1O54962 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.39■□□□□ 0.37
Banf1O54962 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Gm13216-201ENSMUST00000117145 591 ntBASIC17.39■□□□□ 0.37
Banf1O54962 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.39■□□□□ 0.37
Banf1O54962 Gm18025-201ENSMUST00000221733 862 ntBASIC17.39■□□□□ 0.37
Banf1O54962 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Banf1O54962 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Banf1O54962 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Banf1O54962 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Banf1O54962 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Banf1O54962 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Banf1O54962 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Banf1O54962 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms