Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Gm13168-201ENSMUST00000121771 632 ntBASIC17.85■□□□□ 0.45
Per2O54943 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Per2O54943 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Per2O54943 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Per2O54943 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Per2O54943 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Per2O54943 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Per2O54943 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Per2O54943 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.84■□□□□ 0.45
Per2O54943 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Per2O54943 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Per2O54943 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Per2O54943 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Per2O54943 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Per2O54943 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Per2O54943 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Per2O54943 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Per2O54943 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.83■□□□□ 0.44
Per2O54943 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Per2O54943 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Per2O54943 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Per2O54943 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Per2O54943 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Per2O54943 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Per2O54943 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.82■□□□□ 0.44
Per2O54943 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Per2O54943 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Per2O54943 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Per2O54943 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.81■□□□□ 0.44
Per2O54943 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.81■□□□□ 0.44
Per2O54943 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Per2O54943 Gm8520-201ENSMUST00000186517 868 ntBASIC17.81■□□□□ 0.44
Per2O54943 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.81■□□□□ 0.44
Per2O54943 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.81■□□□□ 0.44
Per2O54943 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.81■□□□□ 0.44
Per2O54943 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Per2O54943 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Per2O54943 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Per2O54943 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Per2O54943 Gm37025-201ENSMUST00000195159 829 ntBASIC17.8■□□□□ 0.44
Per2O54943 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Per2O54943 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Per2O54943 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Per2O54943 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.8■□□□□ 0.44
Per2O54943 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Per2O54943 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.79■□□□□ 0.44
Per2O54943 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per2O54943 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per2O54943 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per2O54943 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Per2O54943 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Per2O54943 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Per2O54943 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Per2O54943 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms