Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc4O35988 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc4O35988 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sdc4O35988 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sdc4O35988 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.64■□□□□ 0.41
Sdc4O35988 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.64■□□□□ 0.41
Sdc4O35988 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc4O35988 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sdc4O35988 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Sdc4O35988 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc4O35988 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc4O35988 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sdc4O35988 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sdc4O35988 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sdc4O35988 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc4O35988 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sdc4O35988 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc4O35988 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sdc4O35988 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Sdc4O35988 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc4O35988 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.63■□□□□ 0.41
Sdc4O35988 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc4O35988 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sdc4O35988 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc4O35988 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc4O35988 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc4O35988 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Gm6345-202ENSMUST00000180900 204 ntBASIC17.62■□□□□ 0.41
Sdc4O35988 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.62■□□□□ 0.41
Sdc4O35988 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc4O35988 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.62■□□□□ 0.41
Sdc4O35988 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.61■□□□□ 0.41
Sdc4O35988 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Sdc4O35988 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.61■□□□□ 0.41
Sdc4O35988 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sdc4O35988 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.61■□□□□ 0.41
Sdc4O35988 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sdc4O35988 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sdc4O35988 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc4O35988 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.61■□□□□ 0.41
Sdc4O35988 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sdc4O35988 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.6■□□□□ 0.41
Sdc4O35988 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Gm21362-201ENSMUST00000194272 928 ntBASIC17.6■□□□□ 0.41
Sdc4O35988 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.6■□□□□ 0.41
Sdc4O35988 Gm7367-201ENSMUST00000057611 492 ntBASIC17.6■□□□□ 0.41
Sdc4O35988 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sdc4O35988 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.6■□□□□ 0.41
Sdc4O35988 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sdc4O35988 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Sdc4O35988 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sdc4O35988 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sdc4O35988 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.59■□□□□ 0.41
Sdc4O35988 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.59■□□□□ 0.41
Sdc4O35988 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.59■□□□□ 0.41
Sdc4O35988 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sdc4O35988 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.59■□□□□ 0.41
Sdc4O35988 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.59■□□□□ 0.41
Sdc4O35988 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sdc4O35988 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc4O35988 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.58■□□□□ 0.41
Sdc4O35988 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sdc4O35988 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms