Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Phox2bO35690 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Phox2bO35690 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Phox2bO35690 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Phox2bO35690 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Gm23935-201ENSMUST00000102303 57 ntBASIC17.14■□□□□ 0.33
Phox2bO35690 Gm24270-201ENSMUST00000102326 57 ntBASIC17.14■□□□□ 0.33
Phox2bO35690 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Phox2bO35690 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.14■□□□□ 0.33
Phox2bO35690 Gm24245-201ENSMUST00000157318 57 ntBASIC17.14■□□□□ 0.33
Phox2bO35690 Gm26039-201ENSMUST00000158152 144 ntBASIC17.14■□□□□ 0.33
Phox2bO35690 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Phox2bO35690 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.14■□□□□ 0.33
Phox2bO35690 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Phox2bO35690 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Phox2bO35690 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Phox2bO35690 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Phox2bO35690 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Phox2bO35690 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.13■□□□□ 0.33
Phox2bO35690 Gm4974-201ENSMUST00000209974 875 ntBASIC17.13■□□□□ 0.33
Phox2bO35690 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Phox2bO35690 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Phox2bO35690 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Phox2bO35690 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.12■□□□□ 0.33
Phox2bO35690 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Phox2bO35690 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.12■□□□□ 0.33
Phox2bO35690 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Phox2bO35690 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Phox2bO35690 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Phox2bO35690 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.12■□□□□ 0.33
Phox2bO35690 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Phox2bO35690 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Phox2bO35690 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Phox2bO35690 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Phox2bO35690 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.11■□□□□ 0.33
Phox2bO35690 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.11■□□□□ 0.33
Phox2bO35690 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.11■□□□□ 0.33
Phox2bO35690 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Gm5264-201ENSMUST00000190584 848 ntBASIC17.11■□□□□ 0.33
Phox2bO35690 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.11■□□□□ 0.33
Phox2bO35690 Gm43438-201ENSMUST00000198133 379 ntBASIC17.11■□□□□ 0.33
Phox2bO35690 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.11■□□□□ 0.33
Phox2bO35690 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Phox2bO35690 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Phox2bO35690 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.11■□□□□ 0.33
Phox2bO35690 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Phox2bO35690 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Phox2bO35690 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
Phox2bO35690 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Phox2bO35690 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Phox2bO35690 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms