Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 AC114573.1-201ENSMUST00000224120 1210 ntBASIC16.6■□□□□ 0.25
Lhx8O35652 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Lhx8O35652 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx8O35652 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lhx8O35652 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Lhx8O35652 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC16.59■□□□□ 0.25
Lhx8O35652 Mir5122-201ENSMUST00000175004 89 ntBASIC16.59■□□□□ 0.25
Lhx8O35652 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Lhx8O35652 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.59■□□□□ 0.25
Lhx8O35652 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Lhx8O35652 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx8O35652 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Lhx8O35652 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lhx8O35652 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lhx8O35652 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.58■□□□□ 0.25
Lhx8O35652 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Lhx8O35652 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Lhx8O35652 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.58■□□□□ 0.24
Lhx8O35652 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC16.58■□□□□ 0.24
Lhx8O35652 Gm42516-201ENSMUST00000198691 767 ntBASIC16.58■□□□□ 0.24
Lhx8O35652 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.58■□□□□ 0.24
Lhx8O35652 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx8O35652 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.58■□□□□ 0.24
Lhx8O35652 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx8O35652 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx8O35652 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx8O35652 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx8O35652 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Lhx8O35652 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Lhx8O35652 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.58■□□□□ 0.24
Lhx8O35652 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.58■□□□□ 0.24
Lhx8O35652 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lhx8O35652 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Lhx8O35652 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Lhx8O35652 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Lhx8O35652 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Gm38116-201ENSMUST00000193873 1533 ntBASIC16.57■□□□□ 0.24
Lhx8O35652 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.57■□□□□ 0.24
Lhx8O35652 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.57■□□□□ 0.24
Lhx8O35652 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Lhx8O35652 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.56■□□□□ 0.24
Lhx8O35652 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.56■□□□□ 0.24
Lhx8O35652 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
Lhx8O35652 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.56■□□□□ 0.24
Lhx8O35652 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Dio3-201ENSMUST00000097228 1449 ntBASIC16.56■□□□□ 0.24
Lhx8O35652 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Lhx8O35652 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Lhx8O35652 Gm14740-201ENSMUST00000118538 1150 ntBASIC16.56■□□□□ 0.24
Lhx8O35652 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Mir8112-201ENSMUST00000184382 131 ntBASIC16.56■□□□□ 0.24
Lhx8O35652 Gm44771-201ENSMUST00000206975 626 ntBASIC16.56■□□□□ 0.24
Lhx8O35652 Gm7461-201ENSMUST00000058918 827 ntBASIC16.56■□□□□ 0.24
Lhx8O35652 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Lhx8O35652 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Lhx8O35652 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms