Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Capn1O35350 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Capn1O35350 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Capn1O35350 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Capn1O35350 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.84■□□□□ 0.13
Capn1O35350 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.84■□□□□ 0.13
Capn1O35350 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Gm6659-201ENSMUST00000174752 547 ntBASIC15.84■□□□□ 0.13
Capn1O35350 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Capn1O35350 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.84■□□□□ 0.13
Capn1O35350 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Capn1O35350 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Capn1O35350 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.84■□□□□ 0.13
Capn1O35350 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.13
Capn1O35350 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Capn1O35350 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.83■□□□□ 0.13
Capn1O35350 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Capn1O35350 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.83■□□□□ 0.13
Capn1O35350 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.83■□□□□ 0.12
Capn1O35350 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.83■□□□□ 0.12
Capn1O35350 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.83■□□□□ 0.12
Capn1O35350 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Capn1O35350 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Capn1O35350 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 Gm27463-201ENSMUST00000183569 57 ntBASIC15.82■□□□□ 0.12
Capn1O35350 Gm18959-201ENSMUST00000208954 655 ntBASIC15.82■□□□□ 0.12
Capn1O35350 Gm4974-201ENSMUST00000209974 875 ntBASIC15.82■□□□□ 0.12
Capn1O35350 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Capn1O35350 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Capn1O35350 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Capn1O35350 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.81■□□□□ 0.12
Capn1O35350 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.81■□□□□ 0.12
Capn1O35350 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Capn1O35350 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.81■□□□□ 0.12
Capn1O35350 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Capn1O35350 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Capn1O35350 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.8■□□□□ 0.12
Capn1O35350 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.8■□□□□ 0.12
Capn1O35350 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.8■□□□□ 0.12
Capn1O35350 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Capn1O35350 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Capn1O35350 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Capn1O35350 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Capn1O35350 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Capn1O35350 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Capn1O35350 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Capn1O35350 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Capn1O35350 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Capn1O35350 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Capn1O35350 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Capn1O35350 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms