Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.26■□□□□ 0.03
Alx4O35137 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.26■□□□□ 0.03
Alx4O35137 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Alx4O35137 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.26■□□□□ 0.03
Alx4O35137 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Alx4O35137 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Alx4O35137 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Alx4O35137 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.25■□□□□ 0.03
Alx4O35137 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Alx4O35137 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.25■□□□□ 0.03
Alx4O35137 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Alx4O35137 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Alx4O35137 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.25■□□□□ 0.03
Alx4O35137 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.25■□□□□ 0.03
Alx4O35137 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.25■□□□□ 0.03
Alx4O35137 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Alx4O35137 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Alx4O35137 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Alx4O35137 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.24■□□□□ 0.03
Alx4O35137 Gm5408-201ENSMUST00000197998 747 ntBASIC15.24■□□□□ 0.03
Alx4O35137 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Alx4O35137 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Alx4O35137 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.24■□□□□ 0.03
Alx4O35137 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Alx4O35137 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Alx4O35137 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Alx4O35137 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Alx4O35137 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.23■□□□□ 0.03
Alx4O35137 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Alx4O35137 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.23■□□□□ 0.03
Alx4O35137 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Alx4O35137 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Alx4O35137 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Alx4O35137 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Alx4O35137 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Alx4O35137 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Alx4O35137 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms