Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 Gm37179-201ENSMUST00000194862 823 ntBASIC20.37■□□□□ 0.85
Hdac1O09106 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hdac1O09106 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hdac1O09106 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hdac1O09106 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.36■□□□□ 0.85
Hdac1O09106 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Hdac1O09106 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.36■□□□□ 0.85
Hdac1O09106 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hdac1O09106 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hdac1O09106 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Hdac1O09106 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.35■□□□□ 0.85
Hdac1O09106 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Hdac1O09106 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.35■□□□□ 0.85
Hdac1O09106 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.35■□□□□ 0.85
Hdac1O09106 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC20.35■□□□□ 0.85
Hdac1O09106 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Gm42545-201ENSMUST00000202755 922 ntBASIC20.35■□□□□ 0.85
Hdac1O09106 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Hdac1O09106 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Hdac1O09106 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hdac1O09106 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Hdac1O09106 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hdac1O09106 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hdac1O09106 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Hdac1O09106 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Gm13158-201ENSMUST00000122007 736 ntBASIC20.34■□□□□ 0.85
Hdac1O09106 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.34■□□□□ 0.85
Hdac1O09106 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hdac1O09106 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.34■□□□□ 0.85
Hdac1O09106 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Hdac1O09106 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hdac1O09106 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
Hdac1O09106 Gm37292-201ENSMUST00000192062 758 ntBASIC20.33■□□□□ 0.85
Hdac1O09106 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hdac1O09106 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Hdac1O09106 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hdac1O09106 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.33■□□□□ 0.84
Hdac1O09106 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.33■□□□□ 0.84
Hdac1O09106 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms